Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitermination protein | C9309_25840 | Not Available | Negative | 4937075 - 4937446 | 13924.2 |
| hypothetical protein | C9309_25845 | Not Available | Positive | 4937620 - 4937790 | 6584.08 |
| protein racc | C9309_25850 | Not Available | Positive | 4937865 - 4938140 | 10016.3 |
| hypothetical protein | C9309_25855 | Not Available | Positive | 4938242 - 4939223 | 36079.8 |
| inovirus gp2 family protein | C9309_25870 | Not Available | Positive | 4940859 - 4941053 | 7190.33 |
| hypothetical protein | C9309_25875 | Not Available | Positive | 4941313 - 4941714 | 15586.3 |
| host specificity protein j | C9309_25885 | Not Available | Negative | 4942484 - 4942877 | 13710.3 |
| tail assembly protein | C9309_25890 | Not Available | Negative | 4943116 - 4943748 | 22440.2 |
| peptidoglycan endopeptidase | C9309_25895 | Not Available | Negative | 4943694 - 4944061 | 13893.2 |
| autotransporter domain-containing protein | C9309_25900 | Not Available | Positive | 4944062 - 4944253 | 6451.41 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





