Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | C9309_25725 | Not Available | Positive | 4925247 - 4925939 | 26082.1 |
| hypothetical protein | C9309_25730 | Not Available | Positive | 4925939 - 4926937 | 37451.7 |
| hypothetical protein | C9309_25735 | Not Available | Positive | 4927139 - 4927230 | 3346.12 |
| lysozyme | C9309_25740 | Not Available | Positive | 4927230 - 4927727 | 17889.6 |
| lysis protein | C9309_25745 | Not Available | Positive | 4927724 - 4928161 | 16026.0 |
| hypothetical protein | C9309_25750 | Not Available | Positive | 4928311 - 4928928 | 23375.3 |
| 3'-5' exoribonuclease | C9309_25755 | Not Available | Positive | 4929015 - 4929317 | 11693.7 |
| duf4224 domain-containing protein | C9309_25760 | Not Available | Positive | 4929385 - 4929627 | 9216.22 |
| integrase | C9309_25765 | Not Available | Positive | 4929605 - 4930624 | 38872.1 |
| duf968 domain-containing protein | C9309_25770 | Not Available | Positive | 4930741 - 4931135 | 14676.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





