Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage major capsid protein | C9309_25670 | Not Available | Negative | 4919630 - 4920787 | 43088.9 |
| hypothetical protein | C9309_25675 | Not Available | Negative | 4921079 - 4921303 | 8563.33 |
| trigger factor | C9309_25680 | Not Available | Negative | 4921344 - 4921446 | 3716.55 |
| hypothetical protein | C9309_25685 | Not Available | Positive | 4921594 - 4921671 | 2646.39 |
| hypothetical protein | C9309_25690 | Not Available | Positive | 4921693 - 4921884 | 7240.79 |
| peptidase m85 | C9309_25695 | Not Available | Positive | 4921886 - 4922899 | 37868.0 |
| hypothetical protein | C9309_25705 | Not Available | Negative | 4923270 - 4923347 | 3017.4 |
| hypothetical protein | C9309_25710 | Not Available | Positive | 4923351 - 4924808 | 51364.4 |
| duf1378 family protein | C9309_25715 | Not Available | Positive | 4924944 - 4925123 | 6756.34 |
| duf826 domain-containing protein | C9309_25720 | Not Available | Positive | 4925164 - 4925246 | 2976.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





