Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3168 domain-containing protein | C9309_25540 | Not Available | Negative | 4908194 - 4908538 | 12414.8 |
| hk97 gp10 family phage protein | C9309_25545 | Not Available | Negative | 4908535 - 4908981 | 16656.9 |
| head-tail adaptor protein | C9309_25550 | Not Available | Negative | 4908978 - 4909328 | 12663.4 |
| phage gp6-like head-tail connector protein | C9309_25555 | Not Available | Negative | 4909339 - 4909665 | 12127.8 |
| cell division protein ftsz | C9309_25565 | Not Available | Positive | 4909914 - 4910135 | 8323.16 |
| hypothetical protein | C9309_25570 | Not Available | Positive | 4910135 - 4910305 | 6530.09 |
| hypothetical protein | C9309_25575 | Not Available | Positive | 4910379 - 4910654 | 9929.13 |
| exodeoxyribonuclease viii | C9309_25580 | Not Available | Positive | 4910753 - 4911785 | 38496.3 |
| rhs repeat protein | C9309_25585 | Not Available | Positive | 4911786 - 4913738 | 72917.8 |
| dna repair protein | C9309_25590 | Not Available | Negative | 4913739 - 4913886 | 5454.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





