Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail assembly protein t | C9309_25440 | Not Available | Negative | 4891133 - 4891567 | 16092.0 |
| phage minor tail protein g | C9309_25445 | Not Available | Negative | 4891549 - 4891971 | 15562.3 |
| phage tail protein | C9309_25450 | Not Available | Negative | 4891987 - 4892727 | 25805.2 |
| phage tail protein | C9309_25455 | Not Available | Negative | 4892735 - 4892924 | 7012.13 |
| s49 family peptidase | C9309_25460 | Not Available | Negative | 4892925 - 4893283 | 12573.1 |
| phage portal protein | C9309_25465 | Not Available | Negative | 4893264 - 4894865 | 59593.2 |
| phage tail protein | C9309_25470 | Not Available | Negative | 4894862 - 4895068 | 7643.22 |
| rhs repeat protein | C9309_25475 | Not Available | Positive | 4895089 - 4897230 | 79843.2 |
| phage tail tape measure protein | C9309_25480 | Not Available | Negative | 4897231 - 4899362 | 77629.4 |
| duf977 family protein | C9309_25485 | Not Available | Positive | 4899432 - 4899845 | 15870.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





