Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin activation protein | C9309_25325 | Not Available | Positive | 4878414 - 4878563 | 5783.99 |
| hypothetical protein | C9309_25330 | Not Available | Negative | 4878540 - 4878725 | 7025.23 |
| hypothetical protein | C9309_25335 | Not Available | Negative | 4878985 - 4879179 | 7143.91 |
| is91 family transposase | C9309_25350 | Not Available | Negative | 4880110 - 4881297 | 46303.4 |
| transposase | C9309_25355 | Not Available | Negative | 4881297 - 4881662 | 13761.2 |
| terminase large subunit | C9309_25360 | Not Available | Negative | 4881941 - 4883602 | 60944.2 |
| terminase small subunit | C9309_25365 | Not Available | Negative | 4883599 - 4884162 | 20307.3 |
| duf1983 domain-containing protein | C9309_25370 | Not Available | Positive | 4884237 - 4885286 | 38063.4 |
| ail/lom family protein | C9309_25375 | Not Available | Positive | 4885354 - 4885953 | 21747.0 |
| phage tail protein | C9309_25380 | Not Available | Positive | 4886105 - 4886387 | 10011.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





