Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | C9309_25275 | Not Available | Negative | 4871414 - 4872072 | 23863.1 |
| perc family transcriptional regulator | C9309_25280 | Not Available | Negative | 4872073 - 4872167 | 3683.58 |
| hypothetical protein | C9309_25285 | Not Available | Negative | 4872694 - 4872879 | 6467.13 |
| hypothetical protein | C9309_25290 | Not Available | Negative | 4873107 - 4873256 | 5482.14 |
| hypothetical protein | C9309_25295 | Not Available | Negative | 4873256 - 4873825 | 21485.2 |
| lysozyme | C9309_25300 | Not Available | Negative | 4874100 - 4874554 | 16898.2 |
| autotransporter adhesin ag43 | C9309_25305 | Not Available | Negative | 4874555 - 4876397 | 62272.1 |
| gtpase family protein | C9309_25310 | Not Available | Negative | 4876767 - 4877019 | 9179.01 |
| hypothetical protein | C9309_25315 | Not Available | Negative | 4877020 - 4877362 | 13423.1 |
| alpa family transcriptional regulator | C9309_25320 | Not Available | Negative | 4877449 - 4877727 | 10797.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





