Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase cytochrome b556(fdo) subunit | C9309_25210 | Not Available | Negative | 4862903 - 4863538 | 24621.7 |
| formate dehydrogenase subunit beta | C9309_25215 | Not Available | Negative | 4863535 - 4864379 | 30926.5 |
| duf4329 domain-containing protein | C9309_25220 | Not Available | Positive | 4864380 - 4864954 | 21436.9 |
| hypothetical protein | C9309_25225 | Not Available | Positive | 4864956 - 4865192 | 8624.59 |
| yiix family permuted papain-like enzyme | C9309_25235 | Not Available | Negative | 4866185 - 4866793 | 23171.0 |
| hypothetical protein | C9309_25240 | Not Available | Negative | 4866684 - 4866995 | 11582.0 |
| phage tail protein | C9309_25245 | Not Available | Positive | 4866996 - 4867141 | 5273.49 |
| duf1076 domain-containing protein | C9309_25250 | Not Available | Positive | 4867286 - 4867828 | 19589.0 |
| hypothetical protein | C9309_25265 | Not Available | Positive | 4870849 - 4871034 | 7402.24 |
| dctp deaminase | C9309_25270 | Not Available | Negative | 4870949 - 4871212 | 10518.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





