Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | C9309_25075 | Not Available | Positive | 4838794 - 4840037 | 46155.7 |
| phage tail protein | C9309_25105 | Not Available | Positive | 4846749 - 4847078 | 12740.3 |
| phage minor tail protein l | C9309_25110 | Not Available | Positive | 4847078 - 4847658 | 21397.0 |
| amino acid abc transporter permease | C9309_25120 | Not Available | Positive | 4848542 - 4849645 | 41485.7 |
| amino acid abc transporter atp-binding protein | C9309_25125 | Not Available | Positive | 4849653 - 4850411 | 28594.0 |
| duf1737 domain-containing protein | C9309_25130 | Not Available | Negative | 4850556 - 4851365 | 29008.5 |
| hypothetical protein | C9309_25135 | Not Available | Positive | 4851483 - 4851686 | 7650.57 |
| Trna-arg | Not Available | Not Available | Positive | 4851855 - 4851931 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4852029 - 4852104 | Not Available |
| helix-turn-helix domain-containing protein | C9309_25155 | Not Available | Negative | 4852133 - 4852846 | 26832.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





