Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | C9309_24940 | Not Available | Positive | 4821397 - 4821609 | 7880.91 |
| hypothetical protein | C9309_24945 | Not Available | Positive | 4821830 - 4822087 | 9445.39 |
| hypothetical protein | C9309_24950 | Not Available | Positive | 4822157 - 4822435 | 11378.3 |
| hypothetical protein | C9309_24955 | Not Available | Positive | 4822437 - 4822878 | 16573.1 |
| integrase | C9309_24965 | Not Available | Positive | 4823401 - 4823772 | 13536.3 |
| type iii secretion system effector cif | C9309_24970 | Not Available | Negative | 4823896 - 4824681 | 29599.3 |
| t3ss effector protein nleh | C9309_24975 | Not Available | Negative | 4824948 - 4825829 | 32435.0 |
| phage tail protein | C9309_24980 | Not Available | Negative | 4825934 - 4826203 | 9976.31 |
| flavin reductase family protein | C9309_24990 | Not Available | Negative | 4826669 - 4827238 | 20955.2 |
| n-hydroxyarylamine o-acetyltransferase | C9309_24995 | Not Available | Positive | 4827411 - 4828256 | 32351.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





