Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lexa family transcriptional regulator | C9309_24815 | Not Available | Positive | 4809207 - 4809857 | 24038.9 |
| regulator | C9309_24820 | Not Available | Positive | 4810172 - 4810477 | 11418.1 |
| transcriptional regulator | C9309_24825 | Not Available | Positive | 4810480 - 4810818 | 13177.7 |
| hypothetical protein | C9309_24835 | Not Available | Positive | 4810952 - 4811422 | 18620.2 |
| duf2528 family protein | C9309_24840 | Not Available | Positive | 4811573 - 4811941 | 13791.2 |
| protease ftsh-inhibitory lysogeny factor ciii | C9309_24845 | Not Available | Positive | 4812014 - 4812178 | 6060.25 |
| host cell division inhibitory peptide kil | C9309_24850 | Not Available | Positive | 4812147 - 4812311 | 6385.89 |
| is1 family transposase | C9309_24860 | Not Available | Positive | 4812416 - 4812571 | 6209.61 |
| biofilm development ymgb/arir family protein | C9309_24875 | Not Available | Positive | 4813333 - 4813590 | 9908.9 |
| hypothetical protein | C9309_24880 | Not Available | Negative | 4813753 - 4813944 | 7165.93 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





