Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terminase large subunit | C9309_24645 | Not Available | Negative | 4788313 - 4789224 | 33544.1 |
| hypothetical protein | C9309_24655 | Not Available | Negative | 4790095 - 4790355 | 9972.09 |
| protein yhhh | C9309_24660 | Not Available | Negative | 4790445 - 4790828 | 14531.6 |
| duf4329 domain-containing protein | C9309_24665 | Not Available | Negative | 4790800 - 4792269 | 56152.6 |
| hypothetical protein | C9309_24670 | Not Available | Negative | 4792387 - 4792713 | 12558.1 |
| hypothetical protein | C9309_24675 | Not Available | Negative | 4792713 - 4793271 | 20499.3 |
| hypothetical protein | C9309_24680 | Not Available | Positive | 4793272 - 4794395 | 42833.3 |
| chemotaxis protein | C9309_24685 | Not Available | Positive | 4794392 - 4795297 | 33851.8 |
| patatin-like phospholipase family protein | C9309_24690 | Not Available | Positive | 4795294 - 4796364 | 38283.3 |
| cytoplasmic protein | C9309_24695 | Not Available | Positive | 4796591 - 4796683 | 3444.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





