Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_24595 | Not Available | Negative | 4782515 - 4782601 | 3258.21 |
| hypothetical protein | C9309_24600 | Not Available | Negative | 4782866 - 4783078 | 8202.3 |
| lysozyme | C9309_24605 | Not Available | Negative | 4783156 - 4783689 | 19535.5 |
| hypothetical protein | C9309_24610 | Not Available | Negative | 4783734 - 4783916 | 6767.7 |
| hypothetical protein | C9309_24615 | Not Available | Positive | 4783849 - 4784121 | 10342.7 |
| hypothetical protein | C9309_24620 | Not Available | Positive | 4784070 - 4784414 | 12984.8 |
| holin | C9309_24625 | Not Available | Negative | 4784377 - 4784583 | 7626.34 |
| phage portal protein | C9309_24630 | Not Available | Negative | 4785116 - 4786100 | 36945.2 |
| hypothetical protein | C9309_24635 | Not Available | Negative | 4786046 - 4786267 | 8113.63 |
| phage major capsid protein | C9309_24640 | Not Available | Negative | 4786312 - 4788249 | 69152.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





