Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a deacylase lpxr family protein | C9309_24440 | Not Available | Negative | 4766106 - 4767065 | 34935.9 |
| ylcg family protein | C9309_24445 | Not Available | Positive | 4767403 - 4767525 | 4833.04 |
| antitermination protein | C9309_24450 | Not Available | Positive | 4767540 - 4768229 | 26180.2 |
| rha family transcriptional regulator | C9309_24460 | Not Available | Negative | 4769272 - 4769697 | 15836.0 |
| transcriptional regulator | C9309_24465 | Not Available | Negative | 4769681 - 4770004 | 12197.6 |
| hypothetical protein | C9309_24470 | Not Available | Positive | 4770129 - 4770605 | 17626.0 |
| duf1391 domain-containing protein | C9309_24475 | Not Available | Positive | 4770924 - 4771076 | 5552.49 |
| cell division inhibition protein dicb | C9309_24480 | Not Available | Positive | 4771566 - 4771754 | 7099.8 |
| duf1482 family protein | C9309_24485 | Not Available | Positive | 4771751 - 4771942 | 6828.32 |
| exonuclease | C9309_24490 | Not Available | Positive | 4772036 - 4772672 | 24228.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





