Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_24330 | Not Available | Negative | 4754727 - 4754939 | 8164.27 |
| hypothetical protein | C9309_24335 | Not Available | Negative | 4754990 - 4755297 | 12163.5 |
| hypothetical protein | C9309_24340 | Not Available | Negative | 4755655 - 4755927 | 10097.0 |
| phage polarity suppression protein | C9309_24345 | Not Available | Negative | 4755929 - 4756483 | 20259.1 |
| septation initiation protein | C9309_24350 | Not Available | Negative | 4756480 - 4757232 | 28229.7 |
| alpa family transcriptional regulator | C9309_24355 | Not Available | Positive | 4758147 - 4758407 | 9284.2 |
| host cell division inhibitor icd-like protein | C9309_24360 | Not Available | Positive | 4758404 - 4758952 | 20327.1 |
| hypothetical protein | C9309_24365 | Not Available | Positive | 4758952 - 4759176 | 8433.23 |
| dna replication protein | C9309_24370 | Not Available | Positive | 4759173 - 4759496 | 12090.0 |
| duf2635 domain-containing protein | C9309_24380 | Not Available | Positive | 4759776 - 4760021 | 8906.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





