Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | C9309_24275 | Not Available | Positive | 4750450 - 4750738 | 10448.2 |
| duf968 domain-containing protein | C9309_24280 | Not Available | Negative | 4750739 - 4751519 | 29347.7 |
| hypothetical protein | C9309_24285 | Not Available | Negative | 4751521 - 4751793 | 11233.2 |
| type ii toxin-antitoxin system pard family antitoxin | C9309_24290 | Not Available | Positive | 4751929 - 4752186 | 9361.02 |
| type ii toxin-antitoxin system rele/pare family toxin | C9309_24295 | Not Available | Positive | 4752192 - 4752491 | 11462.6 |
| hypothetical protein | C9309_24305 | Not Available | Negative | 4752696 - 4753040 | 13066.0 |
| hnh endonuclease | C9309_24310 | Not Available | Negative | 4753037 - 4753402 | 13871.8 |
| duf4014 domain-containing protein | C9309_24315 | Not Available | Negative | 4753404 - 4753622 | 8597.85 |
| ead/ea22-like family protein | C9309_24320 | Not Available | Negative | 4753710 - 4754345 | 23027.0 |
| hypothetical protein | C9309_24325 | Not Available | Negative | 4754511 - 4754693 | 7066.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





