Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4222 domain-containing protein | C9309_23560 | Not Available | Positive | 4659343 - 4659585 | 9534.61 |
| hypothetical protein | C9309_23565 | Not Available | Positive | 4659589 - 4659735 | 5927.23 |
| excisionase | C9309_23570 | Not Available | Positive | 4659744 - 4659953 | 8040.66 |
| duf3596 domain-containing protein | C9309_23575 | Not Available | Positive | 4659908 - 4661083 | 44011.0 |
| duf4102 domain-containing protein | C9309_23595 | Not Available | Positive | 4662930 - 4664150 | 46266.1 |
| hypothetical protein | C9309_23600 | Not Available | Positive | 4664189 - 4664605 | 15958.7 |
| hypothetical protein | C9309_23605 | Not Available | Negative | 4664677 - 4666425 | 66535.3 |
| atp-binding protein | C9309_23610 | Not Available | Negative | 4666427 - 4668145 | 66114.8 |
| hypothetical protein | C9309_23615 | Not Available | Positive | 4669528 - 4669746 | 8645.97 |
| hypothetical protein | C9309_23625 | Not Available | Positive | 4670380 - 4670715 | 11999.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





