Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impc protein | C9309_23460 | Not Available | Negative | 4649708 - 4649887 | 6975.43 |
| hypothetical protein | C9309_23465 | Not Available | Negative | 4650117 - 4650315 | 7290.63 |
| replication protein | C9309_23470 | Not Available | Negative | 4650337 - 4651083 | 27961.7 |
| dna-binding protein | C9309_23475 | Not Available | Negative | 4651090 - 4652181 | 40509.2 |
| hypothetical protein | C9309_23480 | Not Available | Positive | 4652260 - 4652715 | 17485.9 |
| rha family transcriptional regulator | C9309_23485 | Not Available | Negative | 4652921 - 4653346 | 15985.4 |
| hypothetical protein | C9309_23490 | Not Available | Negative | 4653330 - 4653602 | 10352.5 |
| helix-turn-helix domain-containing protein | C9309_23495 | Not Available | Positive | 4653711 - 4654112 | 15302.5 |
| antitoxin | C9309_23500 | Not Available | Positive | 4654140 - 4654331 | 7026.17 |
| type ii toxin-antitoxin system rele/pare family toxin | C9309_23505 | Not Available | Positive | 4654331 - 4654618 | 10979.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





