Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nine family protein | C9309_23410 | Not Available | Negative | 4642296 - 4642478 | 7636.32 |
| phage n-6-adenine-methyltransferase | C9309_23415 | Not Available | Negative | 4642475 - 4643002 | 19753.6 |
| recombination protein ninb | C9309_23420 | Not Available | Negative | 4642999 - 4643445 | 17461.1 |
| hypothetical protein | C9309_23425 | Not Available | Negative | 4643749 - 4644675 | 35743.2 |
| hypothetical protein | C9309_23430 | Not Available | Positive | 4645207 - 4645620 | 15297.0 |
| phage integrase family protein | C9309_23435 | Not Available | Positive | 4645622 - 4646407 | 29258.8 |
| para family protein | C9309_23440 | Not Available | Positive | 4647009 - 4647641 | 22399.8 |
| hypothetical protein | C9309_23445 | Not Available | Positive | 4647812 - 4648015 | 7735.2 |
| stba family protein | C9309_23450 | Not Available | Positive | 4648254 - 4649228 | 35728.8 |
| plasmid stability protein | C9309_23455 | Not Available | Positive | 4649232 - 4649624 | 14539.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





