Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | C9309_23245 | Not Available | Negative | 4608531 - 4610249 | 63626.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | C9309_23250 | Not Available | Negative | 4610361 - 4611068 | 26363.8 |
| rcs stress response system protein rcsf | C9309_23255 | Not Available | Negative | 4611065 - 4611469 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | C9309_23260 | Not Available | Negative | 4611587 - 4612402 | 29419.2 |
| methionine abc transporter | C9309_23265 | Not Available | Negative | 4612442 - 4613095 | 23257.6 |
| methionine import atp-binding protein metn | C9309_23270 | Not Available | Negative | 4613088 - 4614119 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | C9309_23275 | Not Available | Positive | 4614307 - 4614882 | 21295.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | C9309_23280 | Not Available | Positive | 4615018 - 4616396 | 48676.8 |
| xdhc family protein | C9309_23285 | Not Available | Positive | 4616406 - 4617362 | 34847.8 |
| hypothetical protein | C9309_23290 | Not Available | Positive | 4617341 - 4617751 | 15478.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





