Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | C9309_23135 | Not Available | Positive | 4587212 - 4587880 | 24564.8 |
| recombination protein ning | C9309_23140 | Not Available | Positive | 4587933 - 4588538 | 23791.4 |
| protein ninh | C9309_23145 | Not Available | Positive | 4588535 - 4588729 | 7162.72 |
| antitermination protein | C9309_23150 | Not Available | Positive | 4588722 - 4589156 | 16421.0 |
| hypothetical protein | C9309_23155 | Not Available | Negative | 4589145 - 4589390 | 9657.71 |
| shiga toxin stx1 subunit a | C9309_23165 | Not Available | Positive | 4589663 - 4590610 | 34815.8 |
| shiga toxin stx1 subunit b | C9309_23170 | Not Available | Positive | 4590620 - 4590889 | 9743.67 |
| hypothetical protein | C9309_23175 | Not Available | Positive | 4591040 - 4591267 | 8711.38 |
| duf1737 domain-containing protein | C9309_23180 | Not Available | Positive | 4591389 - 4591944 | 19812.7 |
| abc transporter atp-binding protein/permease | C9309_23185 | Not Available | Positive | 4592302 - 4593987 | 64970.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





