Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flig | C9309_23080 | Not Available | Negative | 4583429 - 4583570 | 5159.23 |
| hypothetical protein | C9309_23085 | Not Available | Positive | 4583571 - 4583791 | 7829.69 |
| protein ren | C9309_23090 | Not Available | Positive | 4583788 - 4584078 | 10686.1 |
| hypothetical protein | C9309_23095 | Not Available | Positive | 4584149 - 4584427 | 10795.3 |
| hypothetical protein | C9309_23100 | Not Available | Positive | 4584560 - 4584775 | 8769.55 |
| restriction alleviation protein, lar family | C9309_23105 | Not Available | Positive | 4584786 - 4585022 | 8484.88 |
| recombination protein ninb | C9309_23110 | Not Available | Positive | 4584979 - 4585425 | 17421.0 |
| phage n-6-adenine-methyltransferase | C9309_23115 | Not Available | Positive | 4585422 - 4585949 | 19753.6 |
| nine family protein | C9309_23120 | Not Available | Positive | 4585946 - 4586128 | 7526.21 |
| phage antirepressor ant | C9309_23130 | Not Available | Positive | 4586403 - 4587137 | 28218.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





