Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator csgd | C9309_22820 | Not Available | Positive | 4537476 - 4538126 | 24931.0 |
| curli production assembly/transport component csge | C9309_22825 | Not Available | Positive | 4538131 - 4538520 | 14879.6 |
| curli production assembly/transport component csgf | C9309_22830 | Not Available | Positive | 4538545 - 4538961 | 15056.7 |
| curli production assembly/transport component csgg | C9309_22835 | Not Available | Positive | 4538988 - 4539821 | 30559.0 |
| duf1097 domain-containing protein | C9309_22840 | Not Available | Negative | 4539885 - 4540376 | 17061.4 |
| molecular chaperone | C9309_22845 | Not Available | Negative | 4540478 - 4541032 | 20753.4 |
| phosphatase | C9309_22850 | Not Available | Negative | 4541056 - 4541793 | 26833.9 |
| glyoxylate/hydroxypyruvate reductase ghra | C9309_22855 | Not Available | Negative | 4541848 - 4542786 | 35345.4 |
| Trna-ser | Not Available | Not Available | Positive | 4543020 - 4543107 | Not Available |
| duf4942 domain-containing protein | C9309_22865 | Not Available | Negative | 4543257 - 4544099 | 32552.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





