Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_22755 | Not Available | Negative | 4524420 - 4524971 | 20166.8 |
| transcriptional regulator | C9309_22760 | Not Available | Negative | 4525015 - 4525215 | 7342.83 |
| lexa family transcriptional repressor | C9309_22765 | Not Available | Positive | 4525306 - 4525980 | 25082.0 |
| met repressor | C9309_22775 | Not Available | Negative | 4526629 - 4526946 | 12141.4 |
| cystathionine gamma-synthase | C9309_22780 | Not Available | Positive | 4527223 - 4528383 | 41582.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C9309_22785 | Not Available | Positive | 4528386 - 4530818 | 88920.8 |
| methylenetetrahydrofolate reductase | C9309_22790 | Not Available | Positive | 4531167 - 4532057 | 33104.5 |
| catalase/hydroperoxidase hpi(i) | C9309_22795 | Not Available | Positive | 4532386 - 4534566 | 80044.0 |
| dmt family transporter | C9309_22800 | Not Available | Positive | 4534660 - 4535565 | 32826.4 |
| duf1287 domain-containing protein | C9309_22805 | Not Available | Negative | 4535592 - 4536209 | 22987.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





