Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_22540 | Not Available | Positive | 4490164 - 4490511 | 12864.4 |
| replication protein p | C9309_22545 | Not Available | Negative | 4490716 - 4491417 | 26531.9 |
| replication protein o | C9309_22550 | Not Available | Negative | 4491414 - 4492343 | 34529.1 |
| regulator | C9309_22555 | Not Available | Negative | 4492430 - 4492969 | 20242.3 |
| helix-turn-helix domain-containing protein | C9309_22560 | Not Available | Negative | 4493039 - 4493269 | 8150.94 |
| helix-turn-helix transcriptional regulator | C9309_22565 | Not Available | Positive | 4493374 - 4494063 | 25493.6 |
| hypothetical protein | C9309_22570 | Not Available | Positive | 4494145 - 4494408 | 9880.49 |
| hypothetical protein | C9309_22575 | Not Available | Positive | 4494544 - 4494864 | 11347.7 |
| hypothetical protein | C9309_22580 | Not Available | Positive | 4495331 - 4495621 | 10793.0 |
| Trna-phe | Not Available | Not Available | Positive | 4495729 - 4495807 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





