Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_22330 | Not Available | Negative | 4458498 - 4459286 | 29684.5 |
| hypothetical protein | C9309_22335 | Not Available | Negative | 4459364 - 4459786 | 15621.8 |
| xre family transcriptional regulator | C9309_22340 | Not Available | Negative | 4459783 - 4460025 | 8901.58 |
| helix-turn-helix domain-containing protein | C9309_22345 | Not Available | Positive | 4460122 - 4460541 | 15951.2 |
| duf1391 domain-containing protein | C9309_22350 | Not Available | Positive | 4460848 - 4461000 | 5504.44 |
| had family hydrolase | C9309_22355 | Not Available | Positive | 4461458 - 4462244 | 26803.8 |
| sulfurtransferase tusa | C9309_22360 | Not Available | Negative | 4462346 - 4462591 | 9095.09 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | C9309_22365 | Not Available | Positive | 4462812 - 4463477 | 25304.3 |
| protein dcrb | C9309_22370 | Not Available | Positive | 4463550 - 4464107 | 19788.7 |
| mfs transporter | C9309_22375 | Not Available | Negative | 4464111 - 4465328 | 42244.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





