Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyaf | C9309_22165 | Not Available | Positive | 4434302 - 4435159 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | C9309_22170 | Not Available | Positive | 4435342 - 4436838 | 56080.0 |
| cytochrome d ubiquinol oxidase subunit ii | C9309_22175 | Not Available | Positive | 4436850 - 4437986 | 42456.4 |
| cytochrome bd-ii oxidase subunit cbdx | C9309_22180 | Not Available | Positive | 4437999 - 4438091 | 3597.68 |
| hypothetical protein | C9309_22190 | Not Available | Negative | 4438432 - 4438890 | 17945.2 |
| hypothetical protein | C9309_22195 | Not Available | Positive | 4438955 - 4439146 | 7551.28 |
| hypothetical protein | C9309_22200 | Not Available | Positive | 4439348 - 4439857 | 19144.1 |
| dna-binding protein | C9309_22205 | Not Available | Positive | 4439946 - 4440569 | 23983.9 |
| hypothetical protein | C9309_22210 | Not Available | Positive | 4440665 - 4440898 | 8876.17 |
| duf4222 domain-containing protein | C9309_22215 | Not Available | Negative | 4440951 - 4441142 | 7385.81 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





