Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potb | C9309_22065 | Not Available | Negative | 4417402 - 4418265 | 32384.4 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C9309_22070 | Not Available | Negative | 4418249 - 4419385 | 43044.8 |
| peptidase t | C9309_22075 | Not Available | Positive | 4419635 - 4420864 | 44985.1 |
| cupin domain-containing protein | C9309_22080 | Not Available | Negative | 4421010 - 4422131 | 42581.2 |
| duf4102 domain-containing protein | C9309_22085 | Not Available | Positive | 4422380 - 4423609 | 46807.8 |
| alpa family transcriptional regulator | C9309_22090 | Not Available | Positive | 4423974 - 4424162 | 7145.57 |
| host cell division inhibitor icd-like protein | C9309_22095 | Not Available | Positive | 4424215 - 4425492 | 46924.7 |
| hypothetical protein | C9309_22100 | Not Available | Positive | 4425489 - 4425719 | 8364.04 |
| hypothetical protein | C9309_22105 | Not Available | Positive | 4425709 - 4425933 | 8082.78 |
| hypothetical protein | C9309_22110 | Not Available | Positive | 4425926 - 4426291 | 13459.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





