Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | C9309_21415 | Not Available | Positive | 4294768 - 4295931 | 42601.8 |
| multidrug efflux mfs transporter permease subunit emry | C9309_21420 | Not Available | Positive | 4295931 - 4297469 | 56004.4 |
| d-serine dehydratase | C9309_21425 | Not Available | Negative | 4297577 - 4298905 | 47905.4 |
| laci family dna-binding transcriptional regulator | C9309_21435 | Not Available | Positive | 4299384 - 4300379 | 36516.8 |
| glycoside hydrolase family 32 protein | C9309_21440 | Not Available | Negative | 4300387 - 4301820 | 54416.8 |
| aminoimidazole riboside kinase | C9309_21445 | Not Available | Positive | 4302036 - 4302950 | 33034.6 |
| mfs transporter | C9309_21450 | Not Available | Positive | 4303022 - 4303957 | 35488.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | C9309_21455 | Not Available | Negative | 4304022 - 4304834 | 28913.4 |
| protein slyx | C9309_21460 | Not Available | Positive | 4305055 - 4305273 | 8214.8 |
| peptidylprolyl isomerase | C9309_21465 | Not Available | Negative | 4305322 - 4305912 | 20854.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





