Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase cytochrome c-type subunit | C9309_21150 | Not Available | Negative | 4249985 - 4250434 | 16311.5 |
| quinol dehydrogenase ferredoxin subunit naph | C9309_21155 | Not Available | Negative | 4250431 - 4251294 | 31915.4 |
| ferredoxin-type protein napg | C9309_21160 | Not Available | Negative | 4251281 - 4251976 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | C9309_21165 | Not Available | Negative | 4251983 - 4254397 | 90733.1 |
| yqae/pmp3 family membrane protein | C9309_21280 | Not Available | Negative | 4269282 - 4269440 | 5865.57 |
| transcriptional regulator | C9309_21285 | Not Available | Positive | 4269623 - 4269922 | 10596.9 |
| rhodanese-like domain-containing protein ygap | C9309_21290 | Not Available | Positive | 4269932 - 4270456 | 18743.0 |
| dna-binding protein stpa | C9309_21295 | Not Available | Negative | 4270503 - 4270907 | 15348.4 |
| l-alanine exporter alae | C9309_21300 | Not Available | Positive | 4271575 - 4272024 | 16922.0 |
| integrase | C9309_21305 | Not Available | Positive | 4272077 - 4273099 | 38299.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





