Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | C9309_20875 | Not Available | Positive | 4208458 - 4209453 | 36286.7 |
| abc transporter atp-binding protein | C9309_20880 | Not Available | Positive | 4209446 - 4211182 | 63163.3 |
| inner membrane transport permease ybhs | C9309_20885 | Not Available | Positive | 4211175 - 4212308 | 42062.4 |
| inner membrane transport permease ybhr | C9309_20890 | Not Available | Positive | 4212319 - 4213425 | 41568.2 |
| hypothetical protein | C9309_20895 | Not Available | Negative | 4213387 - 4213797 | 15465.6 |
| endonuclease/exonuclease/phosphatase family protein | C9309_20900 | Not Available | Positive | 4213930 - 4214691 | 28790.5 |
| cardiolipin synthase clsb | C9309_20905 | Not Available | Positive | 4214688 - 4215929 | 47636.2 |
| upf0104 family protein | C9309_20910 | Not Available | Positive | 4215929 - 4216885 | 35876.6 |
| bax inhibitor-1/ycca family protein | C9309_20915 | Not Available | Negative | 4216921 - 4217634 | 26020.7 |
| bax inhibitor-1/ycca family protein | C9309_20920 | Not Available | Negative | 4217839 - 4218543 | 25903.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





