Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | C9309_20825 | Not Available | Negative | 4195590 - 4196513 | 34284.3 |
| deferrochelatase/peroxidase efeb | C9309_20830 | Not Available | Negative | 4196997 - 4198268 | 46680.8 |
| iron uptake system protein efeo | C9309_20835 | Not Available | Negative | 4198274 - 4199401 | 41129.8 |
| ferrous iron permease efeu | C9309_20840 | Not Available | Negative | 4199459 - 4200289 | 30345.7 |
| nadar family protein | C9309_20845 | Not Available | Negative | 4200992 - 4201474 | 18673.3 |
| atp-dependent dna helicase ding | C9309_20850 | Not Available | Positive | 4201594 - 4203744 | 81493.0 |
| dna-binding protein ybib | C9309_20855 | Not Available | Positive | 4203772 - 4204734 | 35050.7 |
| dehydrogenase | C9309_20860 | Not Available | Positive | 4204875 - 4205960 | 38899.4 |
| atp-dependent rna helicase rhle | C9309_20865 | Not Available | Negative | 4206191 - 4207555 | 50080.5 |
| transcriptional regulator | C9309_20870 | Not Available | Positive | 4207784 - 4208455 | 25018.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





