Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | C9309_20705 | Not Available | Positive | 4175689 - 4176474 | 28509.0 |
| phosphatase | C9309_20710 | Not Available | Positive | 4176573 - 4177172 | 22733.0 |
| virulence factor brkb family protein | C9309_20715 | Not Available | Positive | 4177166 - 4178038 | 32840.7 |
| d-tyrosyl-trna(tyr) deacylase | C9309_20720 | Not Available | Positive | 4178035 - 4178472 | 15951.0 |
| gnat family n-acetyltransferase | C9309_20725 | Not Available | Positive | 4178469 - 4179458 | 37096.5 |
| alpha/beta hydrolase | C9309_20730 | Not Available | Negative | 4179522 - 4180430 | 33608.2 |
| type ii toxin-antitoxin system rele/pare family toxin | C9309_20735 | Not Available | Positive | 4180659 - 4180970 | 12190.9 |
| helix-turn-helix domain-containing protein | C9309_20740 | Not Available | Positive | 4180971 - 4181261 | 10847.1 |
| copg family transcriptional regulator | C9309_20745 | Not Available | Positive | 4181866 - 4182084 | 8408.23 |
| hypothetical protein | C9309_20750 | Not Available | Positive | 4182303 - 4182545 | 9243.96 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





