Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 4164480 - 4164556 | Not Available |
| porin ompl | C9309_20660 | Not Available | Negative | 4164629 - 4165315 | 26876.3 |
| mfs transporter | C9309_20665 | Not Available | Negative | 4165383 - 4166786 | 51519.0 |
| mfs transporter | C9309_20670 | Not Available | Negative | 4166829 - 4168214 | 50985.1 |
| alpha-glucosidase | C9309_20675 | Not Available | Negative | 4168260 - 4170296 | 77264.8 |
| aldose-1-epimerase | C9309_20680 | Not Available | Negative | 4170495 - 4171421 | 34022.8 |
| sulfoquinovose isomerase | C9309_20685 | Not Available | Negative | 4171535 - 4172776 | 47435.0 |
| sulfofructosephosphate aldolase | C9309_20690 | Not Available | Negative | 4172793 - 4173671 | 31984.9 |
| 3-sulfolactaldehyde reductase | C9309_20695 | Not Available | Negative | 4173695 - 4174591 | 31160.1 |
| ribokinase | C9309_20700 | Not Available | Positive | 4174759 - 4175655 | 31729.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





