Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe2+-dependent dioxygenase | C9309_20215 | Not Available | Positive | 4087002 - 4087679 | 25530.2 |
| dksa/trar family c4-type zinc finger protein | C9309_20220 | Not Available | Positive | 4087753 - 4088019 | 9698.3 |
| duf1471 domain-containing protein | C9309_20225 | Not Available | Positive | 4088284 - 4088544 | 8568.2 |
| isas1 family transposase | C9309_20230 | Not Available | Positive | 4088676 - 4088791 | 4067.05 |
| amidohydrolase | C9309_20235 | Not Available | Negative | 4089015 - 4089782 | 28782.3 |
| inhibitor of vertebrate lysozyme | C9309_20240 | Not Available | Positive | 4089936 - 4090409 | 16873.2 |
| acyl-coa dehydrogenase | C9309_20245 | Not Available | Negative | 4090452 - 4092896 | 89217.6 |
| phosphoheptose isomerase | C9309_20250 | Not Available | Positive | 4093136 - 4093714 | 20816.0 |
| class ii glutamine amidotransferase | C9309_20255 | Not Available | Positive | 4093920 - 4094687 | 28637.2 |
| transpeptidase | C9309_20260 | Not Available | Negative | 4094658 - 4095398 | 28022.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





