Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_20165 | Not Available | Negative | 4075957 - 4076022 | 2716.34 |
| threonine/homoserine exporter rhta | C9309_20170 | Not Available | Positive | 4076257 - 4077144 | 31184.4 |
| dna starvation/stationary phase protection protein | C9309_20175 | Not Available | Positive | 4077443 - 4077946 | 18696.3 |
| amino acid abc transporter substrate-binding protein | C9309_20180 | Not Available | Positive | 4078350 - 4079096 | 27191.5 |
| glutamine abc transporter permease glnp | C9309_20185 | Not Available | Positive | 4079235 - 4079894 | 24331.8 |
| glutamine abc transporter atp-binding protein glnq | C9309_20190 | Not Available | Positive | 4079891 - 4080613 | 26733.6 |
| mechanosensitive channel protein | C9309_20195 | Not Available | Positive | 4080730 - 4082955 | 81878.4 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C9309_20200 | Not Available | Negative | 4082952 - 4083959 | 37305.6 |
| duf1471 domain-containing protein | C9309_20205 | Not Available | Positive | 4084154 - 4084414 | 8896.65 |
| catecholate siderophore receptor fiu | C9309_20210 | Not Available | Positive | 4084678 - 4086960 | 81946.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





