Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron uptake transcriptional regulator | C9309_20110 | Not Available | Positive | 4065753 - 4066199 | 16795.8 |
| hypothetical protein | C9309_20115 | Not Available | Negative | 4066283 - 4066609 | 11999.3 |
| glutaminyl-trna synthetase | C9309_20125 | Not Available | Negative | 4068511 - 4068659 | 5419.33 |
| abc-f family atpase | C9309_20130 | Not Available | Negative | 4068799 - 4070391 | 59861.4 |
| transpeptidase | C9309_20135 | Not Available | Positive | 4070610 - 4071530 | 33327.2 |
| anion transporter | C9309_20140 | Not Available | Negative | 4071589 - 4072707 | 41153.2 |
| transcriptional regulator mntr | C9309_20145 | Not Available | Negative | 4072704 - 4073171 | 17641.3 |
| manganase accumulation protein mnts | C9309_20150 | Not Available | Positive | 4073357 - 4073485 | 5031.31 |
| phosphoethanolamine transferase | C9309_20155 | Not Available | Positive | 4073757 - 4075340 | 59742.4 |
| outer membrane protein x | C9309_20160 | Not Available | Negative | 4075389 - 4075904 | 18603.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





