Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | C9309_20060 | Not Available | Positive | 4057103 - 4057237 | 5267.43 |
| duf2618 domain-containing protein | C9309_20065 | Not Available | Positive | 4057216 - 4057320 | 4288.17 |
| ornithine decarboxylase spef | C9309_20070 | Not Available | Positive | 4057631 - 4059829 | 82529.4 |
| putrescine-ornithine antiporter | C9309_20075 | Not Available | Positive | 4059826 - 4061145 | 46497.6 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | C9309_20080 | Not Available | Negative | 4061201 - 4062841 | 58368.2 |
| replication initiation negative regulator seqa | C9309_20085 | Not Available | Negative | 4062867 - 4063412 | 20385.6 |
| esterase | C9309_20090 | Not Available | Positive | 4063597 - 4064361 | 28448.9 |
| lexa regulated protein | C9309_20095 | Not Available | Positive | 4064501 - 4064794 | 11280.7 |
| flavodoxin-1 | C9309_20100 | Not Available | Positive | 4064934 - 4065464 | 19737.9 |
| fur leader peptide | C9309_20105 | Not Available | Positive | 4065674 - 4065760 | 3108.72 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





