Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | C9309_19505 | Not Available | Negative | 3942935 - 3943999 | 39344.0 |
| fad:protein fmn transferase apbe | C9309_19510 | Not Available | Negative | 3944073 - 3945128 | 38583.0 |
| porin ompc | C9309_19515 | Not Available | Negative | 3945240 - 3946331 | 40097.0 |
| phosphotransferase rcsd | C9309_19520 | Not Available | Positive | 3947070 - 3949742 | 100340.0 |
| dna-binding response regulator | C9309_19525 | Not Available | Positive | 3949759 - 3950409 | 23672.0 |
| hybrid sensor histidine kinase/response regulator | C9309_19530 | Not Available | Negative | 3950495 - 3953344 | 106513.0 |
| duf2135 domain-containing protein | C9309_19535 | Not Available | Negative | 3953619 - 3954395 | 28291.2 |
| duf2300 domain-containing protein | C9309_19540 | Not Available | Negative | 3954400 - 3956049 | 61479.2 |
| alpha-2-macroglobulin family protein | C9309_19545 | Not Available | Negative | 3956050 - 3960444 | 162464.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | C9309_19555 | Not Available | Negative | 3961093 - 3961620 | 19364.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





