Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | C9309_19125 | Not Available | Positive | 3867247 - 3869844 | 93493.4 |
| upf0231 family protein | C9309_19130 | Not Available | Positive | 3870019 - 3870381 | 13942.3 |
| adenosylmethionine decarboxylase | C9309_19135 | Not Available | Negative | 3870419 - 3871213 | 30386.3 |
| polyamine aminopropyltransferase | C9309_19140 | Not Available | Negative | 3871229 - 3872095 | 32323.2 |
| hypothetical protein | C9309_19145 | Not Available | Negative | 3872201 - 3872548 | 12854.4 |
| multicopper oxidase cueo | C9309_19150 | Not Available | Positive | 3872714 - 3874264 | 56673.8 |
| pyrroloquinoline quinone-dependent dehydrogenase | C9309_19155 | Not Available | Negative | 3874311 - 3876701 | 86839.3 |
| hypoxanthine phosphoribosyltransferase | C9309_19160 | Not Available | Positive | 3876907 - 3877443 | 20116.4 |
| carbonate dehydratase | C9309_19165 | Not Available | Negative | 3877484 - 3878146 | 25098.2 |
| abc transporter atp-binding protein | C9309_19170 | Not Available | Positive | 3878255 - 3879181 | 34649.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





