Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf853 domain-containing protein | C9309_19075 | Not Available | Negative | 3854518 - 3856020 | 54212.5 |
| aldehyde reductase ahr | C9309_19080 | Not Available | Negative | 3856150 - 3857169 | 36566.0 |
| Trna-leu | Not Available | Not Available | Positive | 3857365 - 3857449 | Not Available |
| duf4102 domain-containing protein | C9309_19090 | Not Available | Positive | 3857613 - 3858875 | 48348.8 |
| hypothetical protein | C9309_19095 | Not Available | Negative | 3859119 - 3859958 | 31873.4 |
| hypothetical protein | C9309_19100 | Not Available | Negative | 3860098 - 3861684 | 60284.8 |
| copper resistance protein | C9309_19105 | Not Available | Negative | 3861893 - 3861997 | 3794.76 |
| dihydrolipoyllysine-residue acetyltransferase | C9309_19110 | Not Available | Positive | 3862000 - 3863327 | 46923.0 |
| dihydrolipoyl dehydrogenase | C9309_19115 | Not Available | Positive | 3863640 - 3865064 | 50691.4 |
| duf3300 domain-containing protein | C9309_19120 | Not Available | Negative | 3865135 - 3866892 | 65608.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





