Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase type 1 tsac | C9309_18660 | Not Available | Negative | 3786582 - 3787154 | 20641.7 |
| hypothetical protein | C9309_18665 | Not Available | Negative | 3787159 - 3787701 | 19862.0 |
| duf494 domain-containing protein | C9309_18670 | Not Available | Negative | 3787730 - 3788203 | 18484.2 |
| dna-protecting protein dpra | C9309_18675 | Not Available | Negative | 3788175 - 3789299 | 40929.2 |
| peptide deformylase | C9309_18680 | Not Available | Positive | 3789429 - 3789938 | 19343.6 |
| methionyl-trna formyltransferase | C9309_18685 | Not Available | Positive | 3789953 - 3790900 | 34129.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | C9309_18690 | Not Available | Positive | 3790946 - 3792235 | 48315.2 |
| trk system potassium uptake protein trka | C9309_18695 | Not Available | Positive | 3792257 - 3793633 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | C9309_18700 | Not Available | Positive | 3793763 - 3794173 | 14927.7 |
| alternative ribosome-rescue factor a | C9309_18705 | Not Available | Negative | 3794170 - 3794388 | 8171.86 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





