Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glc operon transcriptional activator | C9309_18560 | Not Available | Positive | 3765898 - 3766662 | 28827.9 |
| n-acetyltransferase | C9309_18565 | Not Available | Negative | 3766669 - 3767811 | 43467.7 |
| fatty acyl-amp ligase | C9309_18570 | Not Available | Positive | 3768173 - 3769903 | 63591.2 |
| nad-dependent epimerase/dehydratase family protein | C9309_18575 | Not Available | Positive | 3769900 - 3770814 | 33578.3 |
| acyl carrier protein | C9309_18580 | Not Available | Positive | 3770846 - 3771094 | 9417.69 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | C9309_18585 | Not Available | Positive | 3771094 - 3772266 | 41773.1 |
| lps export abc transporter permease lptg | C9309_18590 | Not Available | Negative | 3772302 - 3773381 | 39770.5 |
| lps export abc transporter permease lptf | C9309_18595 | Not Available | Negative | 3773378 - 3774448 | 39926.2 |
| ytfj family protein | C9309_18600 | Not Available | Negative | 3774479 - 3775039 | 20730.1 |
| hypothetical protein | C9309_18605 | Not Available | Negative | 3775051 - 3775875 | 32080.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





