Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C9309_17785 | Not Available | Positive | 3615191 - 3616780 | 57361.4 |
| phosphoribosylamine--glycine ligase | C9309_17790 | Not Available | Positive | 3616792 - 3618081 | 45899.0 |
| sigma-54-dependent response regulator transcription factor zrar | C9309_17795 | Not Available | Negative | 3618078 - 3619403 | 48520.6 |
| two-component system sensor histidine kinase zras | C9309_17800 | Not Available | Negative | 3619400 - 3620776 | 50490.1 |
| zinc resistance-associated protein | C9309_17805 | Not Available | Positive | 3621014 - 3621439 | 15200.3 |
| duf1481 domain-containing protein | C9309_17810 | Not Available | Negative | 3621441 - 3622136 | 26308.9 |
| dna-binding protein hu-alpha | C9309_17815 | Not Available | Negative | 3622149 - 3622421 | 9535.51 |
| duf416 family protein | C9309_17820 | Not Available | Negative | 3622608 - 3623198 | 22599.9 |
| deoxyribonuclease v | C9309_17825 | Not Available | Negative | 3623241 - 3623912 | 24673.9 |
| uroporphyrinogen decarboxylase | C9309_17830 | Not Available | Negative | 3623922 - 3624986 | 39250.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





