Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C9309_17520 | Not Available | Positive | 3555607 - 3556506 | 33275.5 |
| inner membrane protein yhjd | C9309_17525 | Not Available | Positive | 3556555 - 3557568 | 37872.5 |
| mfs transporter | C9309_17530 | Not Available | Positive | 3557979 - 3559301 | 47180.9 |
| asma family protein | C9309_17535 | Not Available | Negative | 3559535 - 3561595 | 74504.9 |
| cyclic di-gmp phosphodiesterase yhjh | C9309_17540 | Not Available | Negative | 3561665 - 3562432 | 29602.9 |
| 2-dehydro-3-deoxygluconokinase | C9309_17545 | Not Available | Positive | 3562664 - 3563593 | 33963.2 |
| insulinase family protein | C9309_17550 | Not Available | Negative | 3563689 - 3565185 | 55472.4 |
| c4-dicarboxylate abc transporter | C9309_17555 | Not Available | Negative | 3565405 - 3566691 | 45439.2 |
| biofilm formation regulator hmsp | C9309_17560 | Not Available | Negative | 3566874 - 3568862 | 74504.0 |
| cellulose biosynthesis protein bcsc | C9309_17565 | Not Available | Negative | 3568944 - 3572417 | 127652.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





