Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C9309_17465 | Not Available | Positive | 3543367 - 3544389 | 35479.0 |
| sugar abc transporter permease yjff | C9309_17470 | Not Available | Positive | 3544376 - 3545371 | 35008.0 |
| fructose 1,6-bisphosphatase | C9309_17475 | Not Available | Negative | 3545404 - 3546402 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C9309_17480 | Not Available | Positive | 3546578 - 3547951 | 49910.1 |
| ribosome-associated protein | C9309_17485 | Not Available | Negative | 3548107 - 3548658 | 21400.5 |
| metalloprotease pmba | C9309_17490 | Not Available | Positive | 3548752 - 3550104 | 48372.4 |
| glutamate decarboxylase | C9309_17500 | Not Available | Negative | 3550451 - 3550772 | 12425.7 |
| c-type cytochrome | C9309_17505 | Not Available | Negative | 3550983 - 3552380 | 51543.3 |
| trehalase | C9309_17510 | Not Available | Positive | 3552785 - 3554434 | 63718.1 |
| helix-turn-helix transcriptional regulator | C9309_17515 | Not Available | Negative | 3554485 - 3555087 | 22605.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





