Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | C9309_17415 | Not Available | Negative | 3530665 - 3532008 | 49783.6 |
| peptide-methionine (s)-s-oxide reductase | C9309_17420 | Not Available | Negative | 3532331 - 3532969 | 23316.3 |
| translocation and assembly module tama | C9309_17425 | Not Available | Positive | 3533175 - 3534908 | 64799.7 |
| autotransporter assembly complex protein tamb | C9309_17430 | Not Available | Positive | 3534905 - 3538684 | 136843.0 |
| gamma-glutamylcyclotransferase ytfp | C9309_17435 | Not Available | Positive | 3538687 - 3539028 | 12867.2 |
| antitoxin chps | C9309_17440 | Not Available | Positive | 3539240 - 3539491 | 9272.12 |
| type ii toxin-antitoxin system chpb family toxin | C9309_17445 | Not Available | Positive | 3539485 - 3539835 | 12512.2 |
| inorganic pyrophosphatase | C9309_17450 | Not Available | Negative | 3539915 - 3540445 | 19704.6 |
| abc transporter substrate-binding protein | C9309_17455 | Not Available | Positive | 3540755 - 3541711 | 34314.5 |
| sugar abc transporter atp-binding protein | C9309_17460 | Not Available | Positive | 3541851 - 3543353 | 55245.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





