Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_17365 | Not Available | Positive | 3521504 - 3521938 | 16345.0 |
| hypothetical protein | C9309_17370 | Not Available | Positive | 3522037 - 3523104 | 41775.3 |
| iron-sulfur cluster repair protein ytfe | C9309_17375 | Not Available | Negative | 3523351 - 3524013 | 24884.1 |
| dmt family transporter | C9309_17380 | Not Available | Negative | 3524121 - 3525086 | 35249.6 |
| sdr family oxidoreductase | C9309_17385 | Not Available | Negative | 3525194 - 3526054 | 29805.3 |
| transcriptional regulator | C9309_17390 | Not Available | Positive | 3526143 - 3526523 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | C9309_17395 | Not Available | Negative | 3526652 - 3528595 | 70851.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9309_17400 | Not Available | Positive | 3528785 - 3529525 | 27191.4 |
| ytfj family protein | C9309_17405 | Not Available | Negative | 3529515 - 3530072 | 20617.9 |
| duf1107 domain-containing protein | C9309_17410 | Not Available | Positive | 3530397 - 3530603 | 8072.24 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





