Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | C9309_17140 | Not Available | Negative | 3484290 - 3484397 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | C9309_17150 | Not Available | Negative | 3484773 - 3484880 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | C9309_17160 | Not Available | Negative | 3485256 - 3485363 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | C9309_17170 | Not Available | Negative | 3485739 - 3485846 | 3882.93 |
| transporter | C9309_17180 | Not Available | Positive | 3486322 - 3487593 | 47292.4 |
| abc transporter atp-binding protein | C9309_17185 | Not Available | Negative | 3487623 - 3488627 | 37554.6 |
| dipeptide abc transporter atp-binding protein | C9309_17190 | Not Available | Negative | 3488624 - 3489607 | 35830.6 |
| peptide abc transporter permease | C9309_17195 | Not Available | Negative | 3489618 - 3490520 | 32310.5 |
| dipeptide abc transporter permease dppb | C9309_17200 | Not Available | Negative | 3490530 - 3491549 | 37465.4 |
| hypothetical protein | C9309_17205 | Not Available | Positive | 3491512 - 3491727 | 7805.39 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





