Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | C9309_16720 | Not Available | Negative | 3402925 - 3403407 | 17259.6 |
| diguanylate cyclase | C9309_16725 | Not Available | Negative | 3403423 - 3404649 | 45991.2 |
| duf4154 domain-containing protein | C9309_16730 | Not Available | Negative | 3404639 - 3405157 | 18979.2 |
| duf2799 domain-containing protein | C9309_16735 | Not Available | Negative | 3405307 - 3405672 | 13204.3 |
| 3-deoxy-7-phosphoheptulonate synthase arof | C9309_16740 | Not Available | Positive | 3405882 - 3406952 | 38848.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | C9309_16745 | Not Available | Positive | 3406963 - 3408084 | 42016.9 |
| bifunctional chorismate mutase/prephenate dehydratase | C9309_16750 | Not Available | Negative | 3408127 - 3409287 | 43085.8 |
| hypothetical protein | C9309_16755 | Not Available | Negative | 3409386 - 3409433 | 1912.35 |
| ribosome-associated inhibitor a | C9309_16760 | Not Available | Negative | 3409537 - 3409878 | 12755.3 |
| outer membrane protein assembly factor bamd | C9309_16765 | Not Available | Negative | 3410149 - 3410886 | 27830.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





